All post-translational interactions from OmniPathSource:
Imports interactions from all post-translational datasets of OmniPath. The datasets are "omnipath", "kinaseextra", "pathwayextra" and "ligrecextra".
import_post_translational_interactions( resources = NULL, organism = 9606, exclude = NULL, references_by_resource = TRUE, ... )
interactions not reported in these databases are removed. See
get_interaction_resourcesfor more information.
Interactions are available for human, mouse and rat. Choose among: 9606 human (default), 10116 rat and 10090 Mouse
Character: datasets or resources to exclude.
if FALSE, removes the resource name prefixes from the references (PubMed IDs); this way the information which reference comes from which resource will be lost and the PubMed IDs will be unique.
optional additional arguments
interactions <- import_post_translational_interactions( resources = c('BioGRID') )