lipyd package
=============

Subpackages
-----------

.. toctree::

    lipyd.data

Submodules
----------

lipyd.common module
-------------------

.. automodule:: lipyd.common
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.feature module
--------------------

.. automodule:: lipyd.feature
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.formula module
--------------------

.. automodule:: lipyd.formula
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.fragdb module
-------------------

.. automodule:: lipyd.fragdb
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.fragment module
---------------------

.. automodule:: lipyd.fragment
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.lipid module
------------------

.. automodule:: lipyd.lipid
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.lipproc module
--------------------

.. automodule:: lipyd.lipproc
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.log module
----------------

.. automodule:: lipyd.log
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.lookup module
-------------------

.. automodule:: lipyd.lookup
    :members:
    :undoc-members:
    :show-inheritance:



lipyd.mass module
-----------------

.. automodule:: lipyd.mass
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.metabolite module
-----------------------

.. automodule:: lipyd.metabolite
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.mgf module
----------------

.. automodule:: lipyd.mgf
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.moldb module
------------------

.. automodule:: lipyd.moldb
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.ms2 module
----------------

.. automodule:: lipyd.ms2
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.mz module
---------------

.. automodule:: lipyd.mz
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.mzml module
-----------------

.. automodule:: lipyd.mzml
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.name module
-----------------

.. automodule:: lipyd.name
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.plot module
-----------------

.. automodule:: lipyd.plot
    :members:
    :undoc-members:
    :show-inheritance:


lipyd.progress module
---------------------

.. automodule:: lipyd.progress
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.results module
--------------------

.. automodule:: lipyd.results
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.sample module
-------------------

.. automodule:: lipyd.sample
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.sampleattrs module
------------------------

.. automodule:: lipyd.sampleattrs
    :members:
    :undoc-members:
    :show-inheritance:


lipyd.sdf module
----------------

.. automodule:: lipyd.sdf
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.sec module
----------------

.. automodule:: lipyd.sec
    :members:
    :undoc-members:
    :show-inheritance:



lipyd.session module
--------------------

.. automodule:: lipyd.session
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.settings module
---------------------

.. automodule:: lipyd.settings
    :members:
    :undoc-members:
    :show-inheritance:

lipyd.substituent module
------------------------

.. automodule:: lipyd.substituent
    :members:
    :undoc-members:
    :show-inheritance:


Module contents
---------------

.. automodule:: lipyd
    :members:
    :undoc-members:
    :show-inheritance: