Installation¶
Basic (Python API only)¶
pip install omnipath-utils
With database support¶
pip install "omnipath-utils[db]"
With web service¶
pip install "omnipath-utils[server]"
With pypath backends (recommended for building)¶
pip install "omnipath-utils[pypath]"
Development¶
git clone https://github.com/saezlab/omnipath-utils
cd omnipath-utils
uv sync --all-extras
uv run pytest