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Attributes

Attribute table helpers from annnet.core._Annotation.

annnet.core._Annotation.AttributesClass

Functions

set_graph_attribute(key, value)

Set a graph-level attribute.

Parameters:

Name Type Description Default
key str

Attribute name.

required
value Any

Attribute value.

required
get_graph_attribute(key, default=None)

Get a graph-level attribute.

Parameters:

Name Type Description Default
key str

Attribute name.

required
default Any

Value to return if the attribute is missing.

None

Returns:

Type Description
Any
set_vertex_attrs(vertex_id, **attrs)

Upsert pure vertex attributes (non-structural) into the vertex table.

Parameters:

Name Type Description Default
vertex_id str

Vertex identifier.

required
**attrs

Attribute key/value pairs. Structural keys are ignored.

{}
set_vertex_attrs_bulk(updates)

Upsert vertex attributes in bulk.

Parameters:

Name Type Description Default
updates dict[str, dict] | Iterable[tuple[str, dict]]

Mapping or iterable of (vertex_id, attrs) pairs.

required
get_attr_vertex(vertex_id, key, default=None)

Get a single vertex attribute (scalar) or default if missing.

Parameters:

Name Type Description Default
vertex_id str

Vertex identifier.

required
key str

Attribute name.

required
default Any

Value to return if missing.

None

Returns:

Type Description
Any
get_vertex_attribute(vertex_id, attribute)

(Legacy alias) Get a single vertex attribute from the Polars DF [DataFrame].

Parameters:

Name Type Description Default
vertex_id str

Vertex identifier.

required
attribute str or Enum

Column name or enum with .value.

required

Returns:

Type Description
Any | None

Scalar value if present, else None.

See Also

get_attr_vertex

set_edge_attrs(edge_id, **attrs)

Upsert pure edge attributes (non-structural) into the edge DF.

Parameters:

Name Type Description Default
edge_id str

Edge identifier.

required
**attrs

Attribute key/value pairs. Structural keys are ignored.

{}
set_edge_attrs_bulk(updates)

Upsert edge attributes in bulk.

Parameters:

Name Type Description Default
updates dict[str, dict] | Iterable[tuple[str, dict]]

Mapping or iterable of (edge_id, attrs) pairs.

required
get_attr_edge(edge_id, key, default=None)

Get a single edge attribute (scalar) or default if missing.

Parameters:

Name Type Description Default
edge_id str

Edge identifier.

required
key str

Attribute name.

required
default Any

Value to return if missing.

None

Returns:

Type Description
Any
get_edge_attribute(edge_id, attribute)

(Legacy alias) Get a single edge attribute from the Polars DF [DataFrame].

Parameters:

Name Type Description Default
edge_id str

Edge identifier.

required
attribute str or Enum

Column name or enum with .value.

required

Returns:

Type Description
Any | None

Scalar value if present, else None.

See Also

get_attr_edge

set_slice_attrs(slice_id, **attrs)

Upsert pure slice attributes.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
**attrs

Attribute key/value pairs. Structural keys are ignored.

{}
get_slice_attr(slice_id, key, default=None)

Get a single slice attribute (scalar) or default if missing.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
key str

Attribute name.

required
default Any

Value to return if missing.

None

Returns:

Type Description
Any
set_edge_slice_attrs(slice_id, edge_id, **attrs)

Upsert per-slice attributes for a specific edge.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
edge_id str

Edge identifier.

required
**attrs

Attribute key/value pairs. Structural keys are ignored except weight.

{}
get_edge_slice_attr(slice_id, edge_id, key, default=None)

Get a per-slice attribute for an edge.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
edge_id str

Edge identifier.

required
key str

Attribute name.

required
default Any

Value to return if missing.

None

Returns:

Type Description
Any
set_slice_edge_weight(slice_id, edge_id, weight)

Set a legacy per-slice weight override for an edge.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
edge_id str

Edge identifier.

required
weight float

Weight override.

required

Raises:

Type Description
KeyError

If the slice or edge does not exist.

See Also

get_effective_edge_weight

get_effective_edge_weight(edge_id, slice=None)

Resolve the effective weight for an edge, optionally within a slice.

Parameters:

Name Type Description Default
edge_id str

Edge identifier.

required
slice str

If provided, return the slice override if present; otherwise global weight.

None

Returns:

Type Description
float

Effective weight.

audit_attributes()

Audit attribute tables for extra/missing rows and invalid edge-slice pairs.

Returns:

Type Description
dict

Summary with keys: - extra_vertex_rows - extra_edge_rows - missing_vertex_rows - missing_edge_rows - invalid_edge_slice_rows

get_edge_attrs(edge)

Return the full attribute dict for a single edge.

Parameters:

Name Type Description Default
edge int | str

Edge index or edge ID.

required

Returns:

Type Description
dict

Attribute dictionary for that edge. Empty if not found.

get_vertex_attrs(vertex)

Return the full attribute dict for a single vertex.

Parameters:

Name Type Description Default
vertex str

Vertex ID.

required

Returns:

Type Description
dict

Attribute dictionary for that vertex. Empty if not found.

get_attr_edges(indexes=None)

Retrieve edge attributes as a dictionary.

Parameters:

Name Type Description Default
indexes Iterable[int] | None

Edge indices to retrieve. If None, returns all edges.

None

Returns:

Type Description
dict[str, dict]

Mapping of edge_id to attribute dictionaries.

get_attr_vertices(vertices=None)

Retrieve vertex (vertex) attributes as a dictionary.

Parameters:

Name Type Description Default
vertices Iterable[str] | None

Vertex IDs to retrieve. If None, returns all vertices.

None

Returns:

Type Description
dict[str, dict]

Mapping of vertex_id to attribute dictionaries.

get_attr_from_edges(key, default=None)

Extract a specific attribute column for all edges.

Parameters:

Name Type Description Default
key str

Attribute column name to extract.

required
default Any

Value to use if the column or value is missing.

None

Returns:

Type Description
dict[str, Any]

Mapping of edge_id to attribute values.

get_edges_by_attr(key, value)

Retrieve all edges where a given attribute equals a specific value.

Parameters:

Name Type Description Default
key str

Attribute column name to filter on.

required
value Any

Value to match.

required

Returns:

Type Description
list[str]

Edge IDs where the attribute equals value.

get_graph_attributes()

Return a shallow copy of the graph-level attributes dictionary.

Returns:

Type Description
dict

Shallow copy of global graph metadata.

Notes

Returned value is a shallow copy to prevent external mutation.

set_edge_slice_attrs_bulk(slice_id, items)

Upsert edge-slice attributes for a single slice in bulk.

Parameters:

Name Type Description Default
slice_id str

Slice identifier.

required
items Iterable[tuple[str, dict]] | dict[str, dict]

Iterable or mapping of (edge_id, attrs) pairs.

required