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Pathway RespOnsive GENes for activity inference (PROGENy).

Source: R/utils-omnipath.R
get_progeny.Rd

Wrapper to access PROGENy model gene weights. Each pathway is defined with a collection of target genes, each interaction has an associated p-value and weight. The top significant interactions per pathway are returned.

Usage

get_progeny(organism = "human", top = 500)

Arguments

organism

Which organism to use. Only human and mouse are available.

top

Number of genes per pathway to return.

Examples

progeny <- get_progeny(organism='human', top=500)