Frequency ChordDiagram

Usage

chord_freq(
  liana_res,
  source_groups = NULL,
  target_groups = NULL,
  cex = 1,
  transparency = 0.4,
  facing = "clockwise",
  adj = c(-0.5, 0.05),
  ...
)

Arguments

liana_res: aggregated `liana_wrap` results from multiple methods, or alternatively results from running `liana_wrap` with a single method. Should be filtered by some condition (e.g. preferential consesus ranking, specific interactions, etc).
source_groups: names of the source (sender) cell types (NULL = no filter)
target_groups: names of the target cell types (NULL = no filter)
cex: label relative font size
transparency: transparency
facing: axis label rotation (check `circlize::circos.text` for options)
...: other paramters passed to `circlize::chordDiagram`
offset: for text.