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This function converts the output of the runLimma function into a list of limma top tables

Usage

limma_res_to_ttop_list(limma_res, comp_names, number, adjust.method = "fdr")

Arguments

limma_res

output of the runLimma function

comp_names

identifiers of the contrasts that were considered in the runLimma function

number

number of top features to be included in the top table results

adjust.method

method to adjust p-values, same as for the topTable limma function

Value

a list of limma top table results