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map_pathways_to_metabolites

Source: R/support_metabolite_enrichment.R
map_pathways_to_metabolites.Rd

Function to map pathways to enzymes and subsequently to metabolites.

Usage

map_pathways_to_metabolites(metab_df, pathways = redHuman_pathways)

Arguments

metab_df

data frame with metabolites and their target/source enzymes

pathways

the pathway collection to be used to create a metabolite/pathway table. by default the pathway ontology of redHuman is used.

Value

data frame containing metabolites and their pathways