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Dot-class Dot
- An S4 class to represent a DOT object.
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create.DOT()
- Creating a DOT object based on the processed ref and srt data
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dot.sample
- Sample reference scRNA-seq and spatial data
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draw_maps()
- A plotting wrapper for drawing gene/abundance maps on tissue
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run.DOT.highresolution()
- A wrapper for running the DOT algorithm for high-resolution spatial data with suggested parameters
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run.DOT.lowresolution()
- A wrapper for running the DOT algorithm for low-resolution spatial data with suggested parameters
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setup.ref()
- Processing the reference single-cell data
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setup.srt()
- Processing the target spatial data