This function decompresses a solution network by mapping node signatures back to their original identifiers. The input is a formatted solution network, a meta network, node signatures, and duplicated parents. The function returns a list containing the decompressed solution network and attribute table.
Usage
decompress_solution_network(
formatted_res,
meta_network,
node_signatures,
duplicated_parents
)Value
A list containing the following elements:
- SIF
A data frame representing the decompressed solution network.
- ATT
A data frame containing the attributes of the decompressed solution network.
Examples
# Create a sample formatted_res
formatted_res <- list(
SIF = data.frame(source = c("parent_of_D1", "D"),
target = c("D", "F"),
interaction = c(1, 1),
Weight = c(1, 1)),
ATT = data.frame(Nodes = c("parent_of_D1", "D", "F"),
NodeType = c("","",""),
ZeroAct = c(0,0,0),
UpAct = c(1,1,1),
DownAct = c(0,0,0),
AvgAct = c(1,1,1),
measured = c(0,0,0),
Activity = c(1,1,1))
)
# Create a sample meta_network
meta_network <- data.frame(source = c("A", "B", "D"),
target = c("D", "D", "F"),
interaction_type = c(1, 1, 1))
# Define node_signatures and duplicated_parents
node_signatures <- list("A" = "parent_of_D1","B" = "parent_of_D1","D" = "parent_F1")
duplicated_parents <- c("A" = "parent_of_D1","B" = "parent_of_D1")
# Decompress the solution network
result <- decompress_solution_network(formatted_res, meta_network, node_signatures, duplicated_parents)
decompressed_network <- result[[1]]
attribute_table <- result[[2]]