Adds extra columns to enrichment output that inform about 1. The amount of genes associated with term in prior knowledge, 2. The amount of genes detected in input data associated with term in prior knowledge, and 3. The percentage of genes detected in input data associated with term in prior knowledge.

Adds extra columns to enrichment output that inform about 1. The amount of genes associated with term in prior knowledge, 2. The amount of genes detected in input data associated with term in prior knowledge, and 3. The percentage of genes detected in input data associated with term in prior knowledge.

Usage

AddInfo(mat, net, res, .source, .target, complete = FALSE)

Arguments

mat

Data matrix used as input for enrichment analysis

net

Prior Knowledge used as input for enrichment analysis

res

Results returned from the enrichment analysis

.source

used as input for enrichment analysis

.target

used as input for enrichment analysis

complete

TRUE or FALSE, weather only .source with results should be returned or all .source in net.