corneto.io.load_graph_from_sif#

corneto.io.load_graph_from_sif(sif_file, delimiter='\t', has_header=False, discard_self_loops=True, column_order=[0, 1, 2])#

Create graph from Simple Interaction Format (SIF) file.

Parameters:
  • sif_file (str) – Path to SIF file

  • delimiter (str) – Column delimiter in file

  • has_header (bool) – Whether file has a header row

  • discard_self_loops (bool | None) – Whether to ignore self-loops

  • column_order (List[int]) – Order of source, interaction, target columns

Returns:

New Graph loaded from SIF file