Metabolite chemical classes from RaMP DB
Usage
metsigdb_chemicalclass(
version = "2.5.4",
save_table = "csv",
path = NULL,
exclude_metabolites = "all"
)Arguments
- version
Optional: Version of the RaMP database loaded from OmniPathR. default: "2.5.4"
- save_table
Optional: File types for the analysis results are: "csv", "xlsx", "txt". Default = "csv"
- path
Optional: String which is added to the resulting folder name default: NULL
- exclude_metabolites
Optional metabolite classes to exclude: NULL (exclude nothing), "all" (default), or any combination of c("ions", "small_molecules", "xenobiotics", "atoms").