Function reference • mistyR

All functions

add_juxtaview(): Generate and add a juxtaview to the current view composition

add_paraview(): Generate and add a paraview to the current view composition

add_views(): Add custom views to the current view composition

clear_cache(): Clear cached objects

collect_results(): Collect and aggregate results

create_initial_view(): Start here: create a basic view composition with an intraview

create_view(): Create a custom view

extract_signature(): Extract signatures from the results

filter_views(): Filter spatial units

plot_contrast_heatmap(): Plot heatmap of local contrast between two views

plot_contrast_results(): Plot heatmap of contrast between two result lists

plot_improvement_stats(): Plot observed performance and improvement per target

plot_interaction_communities(): Plot marker interaction communities

plot_interaction_heatmap(): Plot importance heatmap for a view

plot_view_contributions(): Plot view contributions per target

remove_views(): Remove views from the current view composition

rename_view(): Rename view in a view composition

run_misty(): Train MISTy models

select_markers(): Select a subset of markers in a view

synthetic: Synthetic benchmark data for mistyR